Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2235 domain-containing protein | DCX48_13115 | Q9KS43 | Negative | 2748241 - 2750235 | 73457.0 |
| 6-phospho-beta-glucosidase | DCX48_13120 | Q46829 | Negative | 2750836 - 2752278 | 55243.3 |
| pts lactose/cellobiose transporter subunit iia | DCX48_13125 | P69793 | Negative | 2752291 - 2752638 | 12810.5 |
| pts sugar transporter subunit iic | DCX48_13130 | P46317 | Negative | 2752628 - 2753941 | 48054.1 |
| pts sugar transporter subunit iib | DCX48_13135 | Q45399 | Negative | 2753958 - 2754263 | 11306.2 |
| laci family dna-binding transcriptional regulator | DCX48_13140 | P24242 | Positive | 2754477 - 2755514 | 37995.5 |
| mfs transporter | DCX48_13145 | P52067 | Positive | 2755587 - 2756777 | 41380.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DCX48_13150 | P0A2I4 | Negative | 2756885 - 2759302 | 89762.9 |
| dna replication/repair protein recf | DCX48_13155 | Q6CYR6 | Negative | 2759321 - 2760406 | 40708.8 |
| dna polymerase iii subunit beta | DCX48_13160 | P0A990 | Negative | 2760456 - 2761556 | 40565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
