Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DCX48_13065 | P42063 | Negative | 2738491 - 2739399 | 32848.4 |
| abc transporter permease | DCX48_13070 | A0A0H2ZGW7 | Negative | 2739396 - 2740373 | 35732.3 |
| nucleoside hydrolase | DCX48_13075 | Q9P6J4 | Negative | 2740373 - 2741344 | 34914.1 |
| nucleoside hydrolase | DCX48_13080 | Q9P6J4 | Negative | 2741346 - 2742299 | 34373.6 |
| dihydrodipicolinate synthase family protein | DCX48_13085 | B8GKG7 | Negative | 2742402 - 2743286 | 31873.6 |
| abc transporter substrate-binding protein | DCX48_13090 | Q6D3B0 | Negative | 2743355 - 2744905 | 56337.3 |
| lysr family transcriptional regulator | DCX48_13095 | Q00678 | Positive | 2745048 - 2745944 | 32739.0 |
| sugar-phosphatase | DCX48_13100 | P0A8Y6 | Negative | 2746090 - 2746905 | 30221.5 |
| integrase | DCX48_13105 | Not Available | Negative | 2747305 - 2747493 | 7315.08 |
| duf2931 family protein | DCX48_13110 | Not Available | Negative | 2747531 - 2748241 | 26651.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
