Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonates abc transporter atp-binding protein | DCX48_13015 | Q6CYU2 | Positive | 2729114 - 2729914 | 28667.8 |
| duf1471 domain-containing protein | DCX48_13020 | P0AAX4 | Positive | 2730087 - 2730344 | 8748.39 |
| mfs transporter | DCX48_13025 | P0AA77 | Negative | 2730449 - 2731738 | 46823.6 |
| galactonate dehydratase | DCX48_13030 | Q6CYT9 | Negative | 2732213 - 2733361 | 42457.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DCX48_13035 | Q6BF16 | Negative | 2733358 - 2733975 | 21529.8 |
| 2-dehydro-3-deoxygalactonokinase | DCX48_13040 | P31459 | Negative | 2733959 - 2734855 | 32884.1 |
| fadr family transcriptional regulator | DCX48_13045 | P31460 | Negative | 2734852 - 2735550 | 26395.4 |
| type ii toxin-antitoxin system rele/pare family toxin | DCX48_13050 | O53468 | Positive | 2735957 - 2736328 | 14160.8 |
| helix-turn-helix domain-containing protein | DCX48_13055 | P9WJA6 | Positive | 2736315 - 2736614 | 11019.8 |
| abc transporter atp-binding protein | DCX48_13060 | Q323W5 | Negative | 2736652 - 2738451 | 66382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
