Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DCX48_12915 | P23847 | Negative | 2705830 - 2707437 | 60153.6 |
| integrase | DCX48_12920 | P16943 | Positive | 2708357 - 2709207 | 31700.1 |
| 2-hydroxycarboxylate transporter family protein | DCX48_12925 | O05256 | Positive | 2709838 - 2711181 | 47521.1 |
| hypothetical protein | DCX48_12930 | Not Available | Negative | 2711262 - 2711537 | 10634.5 |
| hypothetical protein | DCX48_12935 | Not Available | Negative | 2711521 - 2712414 | 33582.5 |
| two-component system response regulator dcur | DCX48_12940 | P59338 | Negative | 2712531 - 2713253 | 27294.8 |
| two-component system sensor histidine kinase dcus | DCX48_12945 | P0AEC9 | Negative | 2713246 - 2714874 | 60574.2 |
| anion permease | DCX48_12950 | O34726 | Negative | 2715042 - 2716454 | 51151.2 |
| putative transporter | DCX48_12955 | Q6CYV4 | Negative | 2716980 - 2718638 | 58983.7 |
| heat shock chaperone ibpb | DCX48_12960 | Q6CYV3 | Negative | 2718829 - 2719281 | 16762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
