Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4432 family protein | DCX48_12865 | Not Available | Negative | 2693905 - 2695113 | 44427.7 |
| valine--pyruvate transaminase | DCX48_12870 | P09053 | Positive | 2695506 - 2696756 | 46522.4 |
| integrase | DCX48_12875 | Not Available | Negative | 2696763 - 2696846 | 3177.0 |
| glycosyl hydrolase family protein | DCX48_12880 | P40740 | Negative | 2696877 - 2698349 | 56415.0 |
| pts beta-glucoside transporter subunit eiibca | DCX48_12885 | P40739 | Negative | 2698370 - 2700274 | 66977.4 |
| prd domain-containing protein | DCX48_12890 | P39805 | Negative | 2700406 - 2701233 | 31893.4 |
| abc transporter atp-binding protein | DCX48_12895 | P37313 | Negative | 2701659 - 2702669 | 37560.6 |
| dipeptide abc transporter atp-binding protein | DCX48_12900 | P0AAG1 | Negative | 2702666 - 2703646 | 35963.8 |
| dipeptide abc transporter permease dppc | DCX48_12905 | P0AEG3 | Negative | 2703660 - 2704562 | 32177.2 |
| dipeptide abc transporter permease dppb | DCX48_12910 | P0AEG0 | Negative | 2704576 - 2705595 | 37373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
