Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DCX48_12815 | P72171 | Negative | 2680307 - 2681362 | 39976.1 |
| serine kinase | DCX48_12820 | O34640 | Negative | 2681520 - 2682527 | 38111.1 |
| ethanolamine permease | DCX48_12825 | O87394 | Positive | 2682786 - 2684147 | 48722.1 |
| aspartate aminotransferase family protein | DCX48_12830 | Q8R1K4 | Positive | 2684181 - 2685524 | 48512.6 |
| gamma-glutamyltransferase | DCX48_12835 | P36267 | Negative | 2685620 - 2687398 | 62762.8 |
| mfs transporter | DCX48_12840 | P39398 | Negative | 2687663 - 2689012 | 49319.2 |
| gntr family transcriptional regulator | DCX48_12845 | P39399 | Negative | 2689226 - 2690140 | 35482.4 |
| zinc-binding alcohol dehydrogenase family protein | DCX48_12850 | P39400 | Positive | 2690280 - 2691302 | 36640.2 |
| tagaturonate reductase | DCX48_12855 | A8AGR0 | Positive | 2691316 - 2692761 | 54404.7 |
| o-acetylserine/cysteine exporter | DCX48_12860 | Q56072 | Negative | 2692837 - 2693748 | 32562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
