Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | DCX48_12765 | P37649 | Negative | 2663187 - 2664335 | 42412.5 |
| cellulose biosynthesis protein bcsg | DCX48_12770 | Q7CPI7 | Negative | 2664837 - 2666483 | 61361.9 |
| cellulose biosynthesis protein bcsf | DCX48_12775 | Q7CPI8 | Negative | 2666485 - 2666703 | 8356.38 |
| cellulose biosynthesis protein bcse | DCX48_12780 | A0A0F6B8A2 | Negative | 2666703 - 2668277 | 59299.7 |
| hypothetical protein | DCX48_12785 | P0ADJ3 | Positive | 2668603 - 2668812 | 7884.16 |
| cellulose synthase operon protein yhjq | DCX48_12790 | Q8Z292 | Positive | 2668815 - 2669552 | 27245.8 |
| udp-forming cellulose synthase catalytic subunit | DCX48_12795 | Q93IN2 | Positive | 2669549 - 2672248 | 102256.0 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | DCX48_12800 | Q93IN1 | Positive | 2672323 - 2674617 | 84605.2 |
| cellulase | DCX48_12805 | Q8X5L9 | Positive | 2674624 - 2675739 | 41499.6 |
| cellulose biosynthesis protein bcsc | DCX48_12810 | P37650 | Positive | 2676831 - 2680301 | 128425.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
