Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase tusa | DCX48_12715 | Q6CZ00 | Negative | 2651022 - 2651267 | 9314.3 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | DCX48_12720 | P37619 | Positive | 2651484 - 2652161 | 25557.6 |
| duf1795 domain-containing protein | DCX48_12725 | P0AEE1 | Positive | 2652313 - 2652879 | 20046.8 |
| duf2235 domain-containing protein | DCX48_12730 | Q9KS43 | Positive | 2653378 - 2655372 | 73340.9 |
| duf2931 family protein | DCX48_12735 | Not Available | Positive | 2655372 - 2656079 | 26329.7 |
| mfs transporter | DCX48_12740 | P37621 | Negative | 2656199 - 2657407 | 41797.1 |
| inner membrane protein yhjd | DCX48_12745 | P45417 | Positive | 2657525 - 2658541 | 37046.1 |
| sugar kinase | DCX48_12750 | P45416 | Positive | 2658709 - 2659641 | 34062.4 |
| insulinase family protein | DCX48_12755 | P37648 | Negative | 2659720 - 2661216 | 55664.6 |
| dicarboxylate/amino acid:cation symporter | DCX48_12760 | Q6CYZ1 | Negative | 2661577 - 2662869 | 45610.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
