Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | DCX48_12665 | P50510 | Negative | 2641372 - 2642229 | 32708.9 |
| cell division protein ftsx | DCX48_12670 | P0AC31 | Negative | 2642561 - 2643529 | 35223.1 |
| cell division atp-binding protein ftse | DCX48_12675 | P0A9R9 | Negative | 2643519 - 2644190 | 24568.0 |
| signal recognition particle-docking protein ftsy | DCX48_12680 | P10121 | Negative | 2644196 - 2645605 | 51537.0 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | DCX48_12685 | P0ADY0 | Positive | 2645955 - 2646530 | 21316.6 |
| duf1145 family protein | DCX48_12690 | P37614 | Positive | 2646557 - 2646835 | 10512.7 |
| duf2500 domain-containing protein | DCX48_12695 | P37615 | Negative | 2646839 - 2647198 | 13776.8 |
| duf1820 family protein | DCX48_12700 | Not Available | Negative | 2647198 - 2647518 | 11838.1 |
| lysoplasmalogenase | DCX48_12705 | P0ADJ1 | Positive | 2647700 - 2648329 | 23768.9 |
| zinc/cadmium/mercury/lead-transporting atpase | DCX48_12710 | Q3YW59 | Positive | 2648424 - 2650787 | 83067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
