Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | DCX48_12615 | P21823 | Positive | 2627556 - 2629226 | 59636.1 |
| methyl-accepting chemotaxis protein | DCX48_12620 | P02942 | Positive | 2629936 - 2631606 | 59947.6 |
| methyl-accepting chemotaxis protein | DCX48_12625 | P07018 | Positive | 2632202 - 2633848 | 58839.7 |
| plp-dependent aminotransferase family protein | DCX48_12630 | H3ZPL1 | Negative | 2634271 - 2635461 | 44152.3 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | DCX48_12635 | P0A192 | Negative | 2635491 - 2636192 | 25650.0 |
| abc transporter atp-binding protein | DCX48_12640 | P0A9S8 | Negative | 2636198 - 2636968 | 28181.5 |
| high-affinity branched-chain amino acid abc transporter permease livm | DCX48_12645 | P22729 | Negative | 2636965 - 2638239 | 46365.1 |
| high-affinity branched-chain amino acid abc transporter permease livh | DCX48_12650 | P0AEX8 | Negative | 2638236 - 2639162 | 32899.3 |
| branched-chain amino acid abc transporter substrate-binding protein | DCX48_12655 | P04816 | Negative | 2639319 - 2640431 | 39432.2 |
| aspartate 1-decarboxylase autocleavage activator panm | DCX48_12660 | Q7CPJ9 | Positive | 2640836 - 2641282 | 17089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
