Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic heavy metal sensor | DCX48_12265 | P0AE86 | Negative | 2570277 - 2570801 | 19695.5 |
| envelope stress response regulator transcription factor cpxr | DCX48_12270 | P0AE89 | Positive | 2570955 - 2571653 | 26377.0 |
| envelope stress sensor histidine kinase cpxa | DCX48_12275 | P0AE84 | Positive | 2571650 - 2573020 | 51807.5 |
| hypothetical protein | DCX48_12280 | Not Available | Positive | 2573185 - 2575353 | 80508.5 |
| duf3142 domain-containing protein | DCX48_12285 | Not Available | Positive | 2575323 - 2576132 | 30895.7 |
| trna (cytidine(34)-2'-o)-methyltransferase | DCX48_12290 | B8CHC9 | Negative | 2576157 - 2576621 | 17367.6 |
| hypothetical protein | DCX48_12295 | Not Available | Positive | 2576943 - 2577239 | 11253.4 |
| aec family transporter | DCX48_12300 | P56949 | Negative | 2577252 - 2578208 | 34051.3 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DCX48_12555 | Q6CZ33 | Negative | 2614350 - 2615195 | 31507.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | DCX48_12560 | Q6CZ32 | Negative | 2615222 - 2616109 | 33024.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
