Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | DCX48_12215 | Q9RMT3 | Negative | 2556956 - 2557819 | 30640.7 |
| nitrate abc transporter substrate-binding protein | DCX48_12220 | P75853 | Positive | 2558258 - 2559265 | 36161.3 |
| tonb-dependent receptor | DCX48_12225 | P46359 | Positive | 2559352 - 2561637 | 83758.9 |
| tat pathway signal sequence domain protein | DCX48_12230 | O31530 | Positive | 2561642 - 2564416 | 102274.0 |
| hypothetical protein | DCX48_12235 | Not Available | Positive | 2564416 - 2565144 | 27871.5 |
| lysr family transcriptional regulator | DCX48_12240 | P52686 | Negative | 2565131 - 2566060 | 35195.1 |
| atp-dependent 6-phosphofructokinase | DCX48_12245 | Q6CZ46 | Negative | 2566581 - 2567543 | 34989.1 |
| cation-efflux pump fief | DCX48_12250 | Q6CZ45 | Negative | 2567751 - 2568653 | 32764.0 |
| sugar transporter | DCX48_12255 | Q6CZ44 | Negative | 2568697 - 2569884 | 42147.5 |
| hypothetical protein | DCX48_12260 | Not Available | Negative | 2569895 - 2570092 | 7158.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
