Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_12165 | Not Available | Positive | 2549847 - 2550251 | 14258.1 |
| integrase | DCX48_12170 | E0SAK8 | Positive | 2550488 - 2550967 | 17172.9 |
| hypothetical protein | DCX48_12175 | E0SAK7 | Positive | 2550977 - 2551384 | 16325.4 |
| hypothetical protein | DCX48_12180 | E0SAK8 | Positive | 2551824 - 2552348 | 18747.4 |
| hypothetical protein | DCX48_12185 | Not Available | Positive | 2552348 - 2552869 | 20393.2 |
| type i toxin-antitoxin system syme family toxin | DCX48_12190 | C4ZT30 | Negative | 2552954 - 2553166 | 8048.91 |
| abc transporter atp-binding protein | DCX48_12195 | Q65M64 | Negative | 2553434 - 2554177 | 27197.2 |
| abc transporter permease | DCX48_12200 | P40401 | Negative | 2554195 - 2555805 | 58424.1 |
| biopolymer transporter exbd | DCX48_12205 | Q9RMT1 | Negative | 2555826 - 2556227 | 14513.7 |
| mota/tolq/exbb proton channel family protein | DCX48_12210 | B0RLE6 | Negative | 2556229 - 2556945 | 25609.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
