Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring assembly protein zapb | DCX48_12065 | Q6CZ88 | Negative | 2527446 - 2527685 | 9177.92 |
| aquaporin | DCX48_12070 | P0AER2 | Positive | 2528236 - 2529075 | 29577.5 |
| glycerol kinase | DCX48_12075 | A8AL00 | Positive | 2529129 - 2530640 | 55682.0 |
| class ii fructose-bisphosphatase | DCX48_12080 | P0A9D0 | Positive | 2530766 - 2531776 | 35824.5 |
| ferredoxin--nadp(+) reductase | DCX48_12085 | P28901 | Positive | 2532083 - 2532829 | 27871.6 |
| duf805 domain-containing protein | DCX48_12090 | P0AF35 | Negative | 2532848 - 2533270 | 16293.3 |
| duf1454 family protein | DCX48_12095 | P32160 | Positive | 2533468 - 2534067 | 21869.3 |
| triose-phosphate isomerase | DCX48_12100 | Q6CZ81 | Positive | 2534217 - 2534984 | 26748.9 |
| agmatine deiminase | DCX48_12105 | Q6CZ80 | Negative | 2535195 - 2536298 | 40702.0 |
| n-carbamoylputrescine amidase | DCX48_12110 | Q8VYF5 | Negative | 2536302 - 2537186 | 32695.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
