Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DCX48_12015 | O34805 | Positive | 2516301 - 2517263 | 35552.7 |
| iron abc transporter permease | DCX48_12020 | Q56992 | Positive | 2517260 - 2518273 | 35120.2 |
| 50s ribosomal protein l31 | DCX48_12025 | Q6CZ96 | Negative | 2518360 - 2518575 | 7799.32 |
| primosomal protein n' | DCX48_12030 | P17888 | Positive | 2518889 - 2521087 | 81570.7 |
| dna-binding transcriptional regulator cytr | DCX48_12035 | P0ACN9 | Positive | 2521359 - 2522402 | 38657.7 |
| cell division protein ftsn | DCX48_12040 | P29131 | Positive | 2522693 - 2523568 | 31840.9 |
| atp-dependent protease subunit hslv | DCX48_12045 | Q6CZ92 | Positive | 2523775 - 2524305 | 19013.9 |
| hslu--hslv peptidase atpase subunit | DCX48_12050 | Q6CZ91 | Positive | 2524315 - 2525646 | 49618.5 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DCX48_12055 | P32166 | Positive | 2525791 - 2526708 | 32719.7 |
| ribonuclease e activity regulator rraa | DCX48_12060 | Q6CZ89 | Positive | 2526843 - 2527328 | 17379.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
