Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | DCX48_11965 | Q6NDI4 | Negative | 2505133 - 2505894 | 27561.6 |
| laci family dna-binding transcriptional regulator | DCX48_11970 | Q87QW9 | Negative | 2505942 - 2506946 | 35251.4 |
| abc transporter permease subunit | DCX48_11975 | Q57SD8 | Negative | 2506943 - 2507749 | 29367.9 |
| sugar abc transporter permease | DCX48_11980 | O51924 | Negative | 2507746 - 2508585 | 30068.0 |
| extracellular solute-binding protein | DCX48_11985 | P19576 | Negative | 2508655 - 2509788 | 41235.7 |
| abc transporter atp-binding protein | DCX48_11990 | Q1QE80 | Negative | 2509811 - 2510977 | 42202.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | DCX48_11995 | P00562 | Negative | 2511184 - 2513619 | 88856.9 |
| cystathionine gamma-synthase | DCX48_12000 | P00935 | Negative | 2513622 - 2514782 | 41358.3 |
| met regulon transcriptional regulator metj | DCX48_12005 | Q6CZA0 | Positive | 2514969 - 2515286 | 12182.5 |
| abc transporter atp-binding protein | DCX48_12010 | Q3K6R9 | Positive | 2515494 - 2516291 | 28748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
