Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilv operon leader peptide | DCX48_11865 | Q8D1L4 | Negative | 2483509 - 2483607 | 3291.44 |
| atp-dependent protease | DCX48_11870 | P22787 | Positive | 2484003 - 2485529 | 55554.7 |
| duf413 domain-containing protein | DCX48_11875 | P0ADN4 | Negative | 2485587 - 2485925 | 13164.3 |
| hth-type transcriptional regulator hdfr | DCX48_11880 | A1JI47 | Positive | 2486046 - 2486873 | 31400.8 |
| sugar abc transporter permease yjff | DCX48_11885 | P37772 | Negative | 2486895 - 2487857 | 34370.3 |
| abc transporter permease | DCX48_11890 | P39328 | Negative | 2487857 - 2488867 | 35036.6 |
| sugar abc transporter atp-binding protein | DCX48_11895 | Q6BEX0 | Negative | 2488854 - 2490374 | 55428.3 |
| abc transporter substrate-binding protein | DCX48_11900 | P39325 | Negative | 2490565 - 2491521 | 34125.1 |
| Trna-trp | Not Available | Not Available | Positive | 2491961 - 2492036 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2492091 - 2492167 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
