Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp oxidoreductase | DCX48_11815 | Q658P3 | Positive | 2472024 - 2472677 | 23415.2 |
| ketol-acid reductoisomerase | DCX48_11820 | Q6CZD1 | Negative | 2472770 - 2474248 | 53636.5 |
| hth-type transcriptional activator ilvy | DCX48_11825 | P05827 | Positive | 2474416 - 2475306 | 33217.5 |
| hypothetical protein | DCX48_11830 | Not Available | Positive | 2475303 - 2476103 | 30053.2 |
| duf2461 domain-containing protein | DCX48_11835 | Not Available | Negative | 2476122 - 2476865 | 29135.3 |
| threonine ammonia-lyase, biosynthetic | DCX48_11840 | P20506 | Negative | 2476959 - 2478503 | 56009.3 |
| dihydroxy-acid dehydratase | DCX48_11845 | Q6CZC7 | Negative | 2478509 - 2480359 | 65650.6 |
| branched-chain amino acid transaminase | DCX48_11850 | P0A1A6 | Negative | 2480433 - 2481359 | 33863.3 |
| acetolactate synthase 2 small subunit | DCX48_11855 | P0ADG2 | Negative | 2481384 - 2481644 | 9768.92 |
| acetolactate synthase 2 catalytic subunit | DCX48_11860 | P0DP90 | Negative | 2481722 - 2483368 | 58823.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
