Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | DCX48_11765 | Q8ZAE1 | Negative | 2456389 - 2457486 | 40984.7 |
| transcription termination factor rho | DCX48_11770 | P0AG32 | Negative | 2457790 - 2459049 | 46966.9 |
| thioredoxin trxa | DCX48_11775 | P0AA27 | Negative | 2459544 - 2459870 | 11723.2 |
| atp-dependent rna helicase rhlb | DCX48_11780 | Q6CZD9 | Positive | 2459989 - 2461281 | 48203.5 |
| exopolyphosphatase | DCX48_11785 | Q6CZD8 | Positive | 2461288 - 2462784 | 55722.7 |
| atp-dependent dna helicase rep | DCX48_11790 | Q9L6S1 | Negative | 2462802 - 2464823 | 77345.8 |
| peptidylprolyl isomerase | DCX48_11795 | P0A9L7 | Positive | 2464983 - 2465264 | 10264.4 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | DCX48_11800 | O52485 | Negative | 2465344 - 2469312 | 145357.0 |
| sodium/proline symporter putp | DCX48_11805 | P10502 | Positive | 2469508 - 2470992 | 53696.5 |
| lysr family transcriptional regulator | DCX48_11810 | A0A0H2ZDG9 | Negative | 2471035 - 2471922 | 32522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
