Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_01290 | Not Available | Negative | 158087 - 158323 | 8535.46 |
| hok/gef family protein | DCX48_01295 | P16477 | Negative | 158555 - 158641 | 3096.8 |
| hypothetical protein | DCX48_01300 | Not Available | Negative | 158727 - 159329 | 21560.8 |
| hypothetical protein | DCX48_01305 | Not Available | Negative | 159343 - 159927 | 21519.7 |
| integrase | DCX48_01310 | Not Available | Positive | 159942 - 160093 | 5793.88 |
| hypothetical protein | DCX48_01315 | Not Available | Positive | 160455 - 160754 | 11108.7 |
| integrase | DCX48_01320 | Not Available | Positive | 160702 - 161362 | 22927.6 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | DCX48_01325 | Q6D482 | Negative | 161247 - 162230 | 37191.9 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | DCX48_01330 | Q6D483 | Negative | 162227 - 162970 | 27813.6 |
| hypothetical protein | DCX48_01335 | P64516 | Negative | 163201 - 163596 | 14962.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
