Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase family protein | DCX48_11565 | P0ADP3 | Positive | 2415658 - 2416146 | 17754.4 |
| eama family transporter rard | DCX48_11570 | Q9L6P1 | Positive | 2416246 - 2417175 | 34908.8 |
| abrb family transcriptional regulator | DCX48_11575 | P75747 | Negative | 2417141 - 2418199 | 37353.2 |
| magnesium/cobalt transporter cora | DCX48_11580 | Q6CZH4 | Negative | 2418427 - 2419377 | 36564.5 |
| cyclase family protein | DCX48_11585 | A0NLY7 | Negative | 2419785 - 2420531 | 27595.4 |
| dna helicase ii | DCX48_11590 | P03018 | Negative | 2420660 - 2422822 | 81818.4 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | DCX48_11595 | P0ADP0 | Negative | 2422905 - 2423621 | 27003.1 |
| tyrosine recombinase xerc | DCX48_11600 | O31087 | Negative | 2423621 - 2424556 | 34576.6 |
| duf484 domain-containing protein | DCX48_11605 | P55886 | Negative | 2424553 - 2425257 | 26680.4 |
| diaminopimelate epimerase | DCX48_11610 | Q6CZG8 | Negative | 2425254 - 2426078 | 30136.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
