Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase subunit glpb | DCX48_11515 | Q6CZI7 | Negative | 2403253 - 2404515 | 45249.5 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | DCX48_11520 | P0A9C1 | Negative | 2404505 - 2406175 | 60225.2 |
| glycerol-3-phosphate transporter | DCX48_11525 | P08194 | Positive | 2406495 - 2407844 | 49979.9 |
| glycerophosphodiester phosphodiesterase | DCX48_11530 | P09394 | Positive | 2407920 - 2409005 | 41550.2 |
| sugar/pyridoxal phosphate phosphatase yigl | DCX48_11535 | P27848 | Negative | 2409185 - 2409985 | 30017.8 |
| lysophospholipase l2 | DCX48_11540 | P59588 | Negative | 2410086 - 2411123 | 39650.2 |
| homoserine/homoserine lactone efflux protein | DCX48_11545 | P0AG36 | Positive | 2411256 - 2411876 | 22162.0 |
| threonine export protein rhtc | DCX48_11550 | P0AG39 | Negative | 2411947 - 2412570 | 22744.6 |
| atp-dependent dna helicase recq | DCX48_11555 | P15043 | Negative | 2412615 - 2414441 | 68385.5 |
| phospholipase a | DCX48_11560 | P37446 | Negative | 2414540 - 2415406 | 33243.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
