Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | DCX48_11465 | Q8FCR6 | Negative | 2394131 - 2395234 | 40026.4 |
| hypothetical protein | DCX48_11470 | Not Available | Positive | 2395332 - 2395535 | 7671.28 |
| yhgn family naat transporter | DCX48_11475 | P67144 | Positive | 2395532 - 2396125 | 21773.1 |
| hypothetical protein | DCX48_11480 | Not Available | Positive | 2396209 - 2396430 | 8253.97 |
| gntp family permease | DCX48_11485 | Q46892 | Negative | 2396469 - 2397845 | 47724.0 |
| integrase | DCX48_11490 | P39208 | Positive | 2398003 - 2398212 | 7461.82 |
| integrase | DCX48_11495 | P0ACP6 | Negative | 2398209 - 2398721 | 18940.0 |
| glycoside hydrolase family 3 protein | DCX48_11500 | P40406 | Positive | 2399082 - 2400878 | 65959.7 |
| pirin family protein | DCX48_11505 | P46852 | Negative | 2400941 - 2401636 | 26494.0 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | DCX48_11510 | P0A997 | Negative | 2402045 - 2403256 | 45197.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
