Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_11415 | Not Available | Positive | 2378715 - 2380430 | 64166.8 |
| hypothetical protein | DCX48_11420 | Not Available | Positive | 2380411 - 2380593 | 6233.35 |
| glycogen phosphorylase | DCX48_11425 | P0AC86 | Negative | 2380685 - 2383132 | 93362.4 |
| glycogen synthase glga | DCX48_11430 | Q6CZK3 | Negative | 2383208 - 2384647 | 52544.1 |
| glucose-1-phosphate adenylyltransferase | DCX48_11435 | Q6CZK2 | Negative | 2384676 - 2385953 | 47815.4 |
| glycogen debranching protein glgx | DCX48_11440 | Q6CZK1 | Negative | 2385990 - 2387966 | 74004.4 |
| 1,4-alpha-glucan branching enzyme | DCX48_11445 | Q6CZK0 | Negative | 2387967 - 2390144 | 83660.3 |
| sensor histidine kinase | DCX48_11450 | P0AD15 | Positive | 2390516 - 2392234 | 63054.3 |
| type ii toxin-antitoxin system hipa family toxin | DCX48_11455 | P23874 | Negative | 2392307 - 2393575 | 47103.0 |
| xre family transcriptional regulator | DCX48_11460 | Not Available | Negative | 2393565 - 2393882 | 11841.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
