Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | DCX48_11315 | P06608 | Positive | 2354248 - 2355297 | 36571.7 |
| ftsx-like permease family protein | DCX48_11320 | Not Available | Negative | 2355440 - 2356723 | 46089.9 |
| abc transporter atp-binding protein | DCX48_11325 | P0A9T9 | Negative | 2356720 - 2357412 | 25256.3 |
| hypothetical protein | DCX48_11330 | Not Available | Negative | 2357421 - 2357900 | 17493.3 |
| alkaline phosphatase | DCX48_11335 | P19111 | Negative | 2357913 - 2359658 | 63772.8 |
| multidrug efflux rnd transporter permease acrd | DCX48_11340 | P24177 | Negative | 2359753 - 2362875 | 113323.0 |
| pimeloyl-[acyl-carrier protein] methyl ester esterase | DCX48_11345 | Q6CZL9 | Negative | 2363059 - 2363826 | 27880.6 |
| dna utilization protein gntx | DCX48_11350 | Q8Z222 | Positive | 2363873 - 2364574 | 26767.7 |
| iron-sulfur cluster biogenesis protein nfua | DCX48_11355 | Q6CZL7 | Positive | 2364635 - 2365210 | 21140.1 |
| 4-alpha-glucanotransferase | DCX48_11360 | P15977 | Negative | 2365281 - 2367356 | 78260.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
