Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iuca/iucc family siderophore biosynthesis protein | DCX48_11265 | P55706 | Negative | 2339025 - 2340926 | 72859.4 |
| coa ester lyase | DCX48_11270 | Q8R4N0 | Positive | 2341177 - 2342058 | 32982.3 |
| transcription elongation factor greb | DCX48_11275 | Q87TB8 | Negative | 2342127 - 2342606 | 18616.1 |
| lysophospholipid acyltransferase family protein | DCX48_11280 | Q92SJ1 | Positive | 2342781 - 2344496 | 64673.9 |
| methyl-accepting chemotaxis protein | DCX48_11285 | P02942 | Positive | 2344886 - 2346553 | 59715.4 |
| citrate synthase | DCX48_11290 | O68883 | Negative | 2346648 - 2347931 | 47577.2 |
| rna-binding transcriptional accessory protein | DCX48_11295 | P46837 | Positive | 2348282 - 2350615 | 85445.1 |
| iclr family transcriptional regulator | DCX48_11300 | P77732 | Positive | 2350844 - 2351632 | 29494.9 |
| 2-keto-3-deoxygluconate permease | DCX48_11305 | Q6CZM7 | Positive | 2352120 - 2353076 | 32539.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DCX48_11310 | Q9XB53 | Positive | 2353088 - 2353924 | 31452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
