Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (atp) | DCX48_11215 | Q6CZP5 | Positive | 2325862 - 2327481 | 59378.3 |
| two-component system sensor histidine kinase envz | DCX48_11220 | A0A0H3NIL4 | Negative | 2327754 - 2329115 | 50525.0 |
| two-component system response regulator ompr | DCX48_11225 | P0AA18 | Negative | 2329112 - 2329831 | 27355.3 |
| transcriptional regulator | DCX48_11230 | P55710 | Negative | 2330163 - 2330573 | 15586.1 |
| abc transporter substrate-binding protein | DCX48_11235 | Not Available | Negative | 2330636 - 2331787 | 43880.7 |
| mfs transporter | DCX48_11240 | P55705 | Negative | 2331780 - 2333030 | 44819.4 |
| hypothetical protein | DCX48_11245 | P55707 | Negative | 2333104 - 2334261 | 42681.5 |
| cysteine synthase family protein | DCX48_11250 | P55708 | Negative | 2334272 - 2335288 | 35970.8 |
| y4ya family plp-dependent enzyme | DCX48_11255 | P55709 | Negative | 2335302 - 2336705 | 51751.7 |
| tonb-dependent siderophore receptor | DCX48_11260 | P11461 | Negative | 2336747 - 2338942 | 78227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
