Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | DCX48_01240 | P0AB26 | Negative | 146710 - 147276 | 20720.2 |
| glutaredoxin 2 | DCX48_01245 | P0AC61 | Negative | 147463 - 148110 | 24107.2 |
| multidrug efflux mfs transporter mdth | DCX48_01250 | Q6D469 | Negative | 148292 - 149497 | 44510.1 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | DCX48_01255 | P0A949 | Positive | 149812 - 150396 | 22685.9 |
| duf480 domain-containing protein | DCX48_01260 | Q6D471 | Positive | 150406 - 151044 | 23853.2 |
| gfo/idh/moca family oxidoreductase | DCX48_01265 | P37168 | Positive | 151074 - 152039 | 35957.8 |
| murein biosynthesis integral membrane protein murj | DCX48_01270 | P0AF17 | Positive | 152167 - 153702 | 55987.7 |
| arginine--trna ligase | DCX48_01275 | Q6D474 | Negative | 153800 - 155530 | 64278.0 |
| voc family protein | DCX48_01280 | P52007 | Positive | 156186 - 156734 | 20355.4 |
| copper homeostasis protein cutc | DCX48_01285 | Q6D476 | Positive | 157173 - 157931 | 27629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
