Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DCX48_11065 | P76128 | Negative | 2293924 - 2295534 | 59503.6 |
| enolase | DCX48_11070 | A9CEQ8 | Negative | 2295617 - 2296771 | 42925.0 |
| hypothetical protein | DCX48_11075 | Not Available | Positive | 2297155 - 2297352 | 7579.63 |
| nitrite reductase large subunit | DCX48_11080 | P08201 | Positive | 2297407 - 2299959 | 93588.2 |
| nitrite reductase small subunit nird | DCX48_11085 | P0A230 | Positive | 2299956 - 2300324 | 13468.8 |
| uroporphyrinogen-iii c-methyltransferase | DCX48_11090 | Q6CZS0 | Positive | 2300351 - 2301730 | 50513.5 |
| abc transporter permease subunit | DCX48_11095 | P0A4N6 | Positive | 2302219 - 2302935 | 25435.6 |
| abc transporter permease | DCX48_11100 | P35114 | Positive | 2302935 - 2303669 | 27154.2 |
| atp-binding cassette domain-containing protein | DCX48_11105 | P0A2V3 | Positive | 2303666 - 2304430 | 28302.2 |
| transporter substrate-binding domain-containing protein | DCX48_11110 | P0A4F9 | Positive | 2304662 - 2305531 | 31262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
