Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DCX48_01190 | P43672 | Positive | 136595 - 138505 | 71655.4 |
| membrane integrity-associated transporter subunit pqia | DCX48_01195 | P0AFM0 | Positive | 138606 - 139952 | 50067.9 |
| intermembrane transport protein pqib | DCX48_01200 | P43671 | Positive | 139939 - 141579 | 60611.0 |
| membrane integrity-associated transporter subunit pqic | DCX48_01205 | P0AB10 | Positive | 141579 - 142145 | 20694.7 |
| integrase | DCX48_01210 | Not Available | Negative | 142321 - 142537 | 7969.65 |
| ribosome modulation factor | DCX48_01215 | A8GCL2 | Positive | 142462 - 142629 | 6483.78 |
| hypothetical protein | DCX48_01220 | Q9I6V6 | Positive | 143055 - 144614 | 55884.2 |
| Trna-ser | Not Available | Not Available | Positive | 144907 - 144996 | Not Available |
| phosphatase | DCX48_01230 | Q6D465 | Positive | 145275 - 146012 | 27135.3 |
| molecular chaperone | DCX48_01235 | P75915 | Positive | 146059 - 146637 | 21652.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
