Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p--(r)-beta-lysine ligase | DCX48_10515 | Q6D033 | Negative | 2193683 - 2194660 | 36783.8 |
| fumarate reductase (quinol) flavoprotein subunit | DCX48_10520 | V3TQ67 | Positive | 2195133 - 2196929 | 66082.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DCX48_10525 | P20921 | Positive | 2196922 - 2197659 | 27459.1 |
| fumarate reductase subunit frdc | DCX48_10530 | A1JIQ1 | Positive | 2197673 - 2198068 | 14626.5 |
| fumarate reductase subunit frdd | DCX48_10535 | Q6D029 | Positive | 2198083 - 2198439 | 13043.6 |
| outer membrane lipoprotein blc | DCX48_10540 | P0A902 | Positive | 2198562 - 2199146 | 22198.7 |
| hypothetical protein | DCX48_10545 | Not Available | Negative | 2199265 - 2199618 | 13401.8 |
| entericidin a/b family lipoprotein | DCX48_10550 | P0ADB9 | Negative | 2199732 - 2199863 | 4466.51 |
| elongation factor p | DCX48_10555 | Q6D025 | Negative | 2200047 - 2200613 | 20850.5 |
| ef-p beta-lysylation protein epmb | DCX48_10560 | P39280 | Positive | 2200655 - 2201698 | 39217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
