Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DCX48_10465 | C0H3S9 | Negative | 2183733 - 2184056 | 12150.5 |
| alpha/beta hydrolase | DCX48_10470 | O05235 | Positive | 2184104 - 2184943 | 31238.4 |
| cupin domain-containing protein | DCX48_10475 | Q5LT18 | Positive | 2184954 - 2185589 | 23850.4 |
| hypothetical protein | DCX48_10480 | Not Available | Negative | 2185641 - 2186186 | 20005.3 |
| Trna-gly | Not Available | Not Available | Positive | 2186731 - 2186806 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2186883 - 2186958 | Not Available |
| oligoribonuclease | DCX48_10495 | Q6D037 | Negative | 2187153 - 2187695 | 20640.6 |
| small ribosomal subunit biogenesis gtpase rsga | DCX48_10500 | Q6D036 | Positive | 2188003 - 2189052 | 39165.9 |
| phosphatidylserine decarboxylase | DCX48_10505 | Q6D035 | Positive | 2189196 - 2190221 | 37763.3 |
| miniconductance mechanosensitive channel mscm | DCX48_10510 | P39285 | Positive | 2190276 - 2193599 | 124029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
