Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_10415 | Not Available | Negative | 2172274 - 2173986 | 64218.9 |
| nad(p)-dependent alcohol dehydrogenase | DCX48_10420 | P75691 | Negative | 2174372 - 2175421 | 37277.7 |
| lyse family translocator | DCX48_10425 | O05406 | Negative | 2175624 - 2176241 | 22188.8 |
| lysr family transcriptional regulator | DCX48_10430 | P34818 | Positive | 2176494 - 2177378 | 33005.6 |
| mfs transporter | DCX48_10435 | O34929 | Positive | 2177398 - 2178564 | 40951.2 |
| abc transporter atp-binding protein | DCX48_10440 | Q8X5I6 | Negative | 2178636 - 2179454 | 30683.5 |
| abc transporter permease | DCX48_10445 | Q8FUN2 | Negative | 2179451 - 2180215 | 28037.1 |
| abc transporter substrate-binding protein | DCX48_10450 | Q8YDR6 | Negative | 2180231 - 2181250 | 36765.4 |
| noncanonical pyrimidine nucleotidase, yjjg family | DCX48_10455 | O06480 | Negative | 2181621 - 2182316 | 25768.4 |
| mfs transporter | DCX48_10460 | B1J9Y3 | Negative | 2182313 - 2183545 | 42258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
