Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | DCX48_10315 | P37773 | Positive | 2148171 - 2149562 | 50729.3 |
| adenylosuccinate synthase | DCX48_10320 | Q6D072 | Negative | 2149662 - 2150960 | 47073.6 |
| duf2065 domain-containing protein | DCX48_10325 | P0AF74 | Negative | 2151060 - 2151260 | 7316.5 |
| protease modulator hflc | DCX48_10330 | P0ABC5 | Negative | 2151387 - 2152382 | 37531.8 |
| ftsh protease activity modulator hflk | DCX48_10335 | P0ABC8 | Negative | 2152386 - 2153639 | 45585.3 |
| gtpase hflx | DCX48_10340 | P25519 | Negative | 2153732 - 2155012 | 48272.0 |
| rna chaperone hfq | DCX48_10345 | Q6D067 | Negative | 2155107 - 2155406 | 10921.8 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DCX48_10350 | Q6D066 | Negative | 2155519 - 2156460 | 35101.1 |
| dna mismatch repair endonuclease mutl | DCX48_10355 | Q6D065 | Negative | 2156453 - 2158408 | 72569.4 |
| n-acetylmuramoyl-l-alanine amidase amib | DCX48_10360 | P26365 | Negative | 2158460 - 2160145 | 60170.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
