Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate mutase gpmb | DCX48_10165 | A7MIJ0 | Negative | 2114099 - 2114749 | 23804.6 |
| non-canonical purine ntp phosphatase | DCX48_10170 | Q6D0A1 | Positive | 2114800 - 2115339 | 19631.7 |
| trp operon repressor | DCX48_10175 | Q6D0A0 | Negative | 2115358 - 2115690 | 12181.9 |
| murein transglycosylase | DCX48_10180 | P39434 | Negative | 2115763 - 2117697 | 73521.2 |
| energy-dependent translational throttle protein etta | DCX48_10185 | A0A0H2VFI8 | Positive | 2118166 - 2119833 | 62313.1 |
| hamp domain-containing protein | DCX48_10190 | P05704 | Negative | 2119917 - 2121617 | 60645.1 |
| lysr family transcriptional regulator | DCX48_10195 | A0A0H2ZDG9 | Negative | 2121873 - 2122778 | 33853.0 |
| zinc-binding alcohol dehydrogenase family protein | DCX48_10200 | P63475 | Positive | 2122898 - 2123899 | 36001.2 |
| phosphoglycerate dehydrogenase | DCX48_10205 | P0A9T2 | Negative | 2124154 - 2125386 | 44220.6 |
| ribose-5-phosphate isomerase rpia | DCX48_10210 | Q6D093 | Negative | 2125681 - 2126340 | 23009.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
