Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | DCX48_10115 | Q6D0B2 | Negative | 2103123 - 2104076 | 35259.2 |
| peroxide stress protein yaaa | DCX48_10120 | Q6D0B1 | Positive | 2104380 - 2105153 | 29072.8 |
| threonine synthase | DCX48_10125 | P27735 | Negative | 2105216 - 2106505 | 47239.3 |
| homoserine kinase | DCX48_10130 | Q6D0A9 | Negative | 2106509 - 2107438 | 33239.1 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DCX48_10135 | P27725 | Negative | 2107441 - 2109900 | 88785.9 |
| thr operon leader peptide | DCX48_10140 | Not Available | Negative | 2110047 - 2110133 | 3030.7 |
| trna/rrna methyltransferase | DCX48_10145 | P37005 | Negative | 2110327 - 2111013 | 25459.8 |
| two-component system response regulator arca | DCX48_10150 | P0A9Q3 | Positive | 2111761 - 2112477 | 27185.6 |
| protein crea | DCX48_10155 | P0AE93 | Negative | 2112534 - 2113016 | 17121.7 |
| mdr efflux pump acrab transcriptional activator roba | DCX48_10160 | P0ACI1 | Positive | 2113223 - 2114110 | 34012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
