Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fad synthetase | DCX48_10065 | P0AG42 | Negative | 2091065 - 2092006 | 34582.0 |
| 30s ribosomal protein s20 | DCX48_10070 | Q6D0C1 | Positive | 2092432 - 2092695 | 9807.06 |
| transcriptional activator nhar | DCX48_10075 | P0A9G2 | Negative | 2092773 - 2093693 | 34867.0 |
| na+/h+ antiporter nhaa | DCX48_10080 | Q6D0B9 | Negative | 2093725 - 2094921 | 42268.8 |
| molecular chaperone dnaj | DCX48_10085 | Q6D0B8 | Negative | 2095209 - 2096348 | 41214.8 |
| molecular chaperone dnak | DCX48_10090 | Q6D0B7 | Negative | 2096457 - 2098364 | 68925.7 |
| acetate uptake transporter | DCX48_10095 | P0AC99 | Positive | 2098826 - 2099401 | 20219.1 |
| mfs transporter | DCX48_10100 | Q6GJ96 | Negative | 2099515 - 2100852 | 47851.9 |
| molybdopterin adenylyltransferase | DCX48_10105 | P0AF04 | Negative | 2100980 - 2101567 | 21271.8 |
| ggdef domain-containing protein | DCX48_10110 | Q9A5I5 | Positive | 2101959 - 2103047 | 40541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
