Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine exporter | DCX48_10015 | Q6D0D4 | Negative | 2078171 - 2078641 | 16873.6 |
| threonine/serine exporter thre family protein | DCX48_10020 | A0A0H3FRB6 | Negative | 2078632 - 2079405 | 27688.5 |
| lyse family translocator | DCX48_10025 | P0AG39 | Positive | 2079609 - 2080223 | 22285.2 |
| carbamoyl-phosphate synthase large subunit | DCX48_10030 | Q8ZIL4 | Negative | 2080311 - 2083535 | 117909.0 |
| carbamoyl-phosphate synthase small subunit | DCX48_10035 | Q6D0C8 | Negative | 2083550 - 2084698 | 41580.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DCX48_10040 | Q6D0C7 | Negative | 2085145 - 2085966 | 28869.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DCX48_10045 | Q6D0C6 | Negative | 2086304 - 2087254 | 34779.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DCX48_10050 | P0AEM2 | Negative | 2087235 - 2087708 | 17013.1 |
| lipoprotein signal peptidase | DCX48_10055 | Q8XA48 | Negative | 2087708 - 2088223 | 19059.4 |
| isoleucine--trna ligase | DCX48_10060 | Q6D0C3 | Negative | 2088220 - 2091033 | 104920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
