Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylan 1,4-beta-xylosidase | DCX48_09915 | A9ZND1 | Negative | 2054387 - 2056009 | 60482.7 |
| ilvb operon leader peptide ivbl | DCX48_09920 | Not Available | Positive | 2056296 - 2056418 | 4073.06 |
| acetolactate synthase large subunit | DCX48_09925 | P08142 | Positive | 2056514 - 2058193 | 59868.3 |
| acetolactate synthase 1 small subunit | DCX48_09930 | P0ADG0 | Positive | 2058199 - 2058492 | 11260.7 |
| deda family protein | DCX48_09935 | P30149 | Negative | 2058528 - 2059298 | 28595.1 |
| ggdef domain-containing protein | DCX48_09940 | Q8X8Q3 | Positive | 2059446 - 2061026 | 59609.9 |
| dna polymerase ii | DCX48_09945 | P21189 | Positive | 2061140 - 2063503 | 90336.1 |
| rna polymerase-associated protein rapa | DCX48_09950 | Q6D0E6 | Positive | 2063689 - 2066592 | 109842.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | DCX48_09955 | Q8ZIK1 | Positive | 2066791 - 2067444 | 24572.6 |
| co-chaperone djla | DCX48_09960 | Q6D0E4 | Negative | 2067541 - 2068416 | 33158.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
