Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | DCX48_09865 | P05704 | Negative | 2043577 - 2045196 | 58264.2 |
| hypothetical protein | DCX48_09870 | Not Available | Positive | 2045767 - 2045994 | 8665.31 |
| hypothetical protein | DCX48_09875 | Not Available | Positive | 2046023 - 2046580 | 20245.8 |
| glucose uptake inhibitor sgrt | DCX48_09880 | Not Available | Negative | 2046713 - 2046877 | 6766.12 |
| hth-type transcriptional regulator sgrr | DCX48_09885 | Q6D0F8 | Positive | 2046968 - 2048626 | 64715.5 |
| aromatic alcohol reductase | DCX48_09890 | W7MC44 | Negative | 2048678 - 2049607 | 34508.5 |
| lysr family transcriptional regulator | DCX48_09895 | P37641 | Positive | 2049890 - 2050795 | 33453.1 |
| thiamine abc transporter substrate binding subunit | DCX48_09900 | P31550 | Positive | 2051086 - 2052102 | 37591.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DCX48_09905 | Q8ZRV1 | Positive | 2052078 - 2053685 | 59556.8 |
| thiamine abc transporter atp-binding protein thiq | DCX48_09910 | Q6D0F3 | Positive | 2053672 - 2054382 | 25944.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
