Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase small subunit | DCX48_09815 | P21622 | Negative | 2031710 - 2032201 | 17999.9 |
| acetolactate synthase 3 large subunit | DCX48_09820 | P00893 | Negative | 2032204 - 2033922 | 62392.3 |
| long-chain fatty acid--coa ligase | DCX48_09825 | P44446 | Negative | 2034285 - 2036090 | 68515.7 |
| 2-isopropylmalate synthase | DCX48_09830 | Q6D0G8 | Positive | 2036506 - 2038104 | 58715.6 |
| 3-isopropylmalate dehydrogenase | DCX48_09835 | Q6D0G7 | Positive | 2038104 - 2039195 | 39204.0 |
| 3-isopropylmalate dehydratase large subunit | DCX48_09840 | Q6D0G6 | Positive | 2039198 - 2040598 | 49937.9 |
| 3-isopropylmalate dehydratase small subunit | DCX48_09845 | Q6D0G5 | Positive | 2040612 - 2041214 | 22625.6 |
| azld domain-containing protein | DCX48_09850 | Not Available | Negative | 2041295 - 2041606 | 11479.8 |
| branched-chain amino acid abc transporter permease | DCX48_09855 | P76630 | Negative | 2041603 - 2042337 | 26383.0 |
| arac family transcriptional regulator | DCX48_09860 | O31449 | Negative | 2042522 - 2043358 | 31537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
