Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seca regulator secm | DCX48_09715 | Q6D0J1 | Negative | 2010044 - 2010559 | 19242.1 |
| duf721 domain-containing protein | DCX48_09720 | Not Available | Positive | 2010587 - 2011114 | 19307.4 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | DCX48_09725 | Q6D0I9 | Negative | 2011127 - 2012044 | 33950.9 |
| cell division protein ftsz | DCX48_09730 | P0A9A8 | Negative | 2012149 - 2013300 | 40435.5 |
| cell division protein ftsa | DCX48_09735 | P0ABH2 | Negative | 2013369 - 2014625 | 45263.5 |
| cell division protein ftsq | DCX48_09740 | Q7CGB1 | Negative | 2014622 - 2015506 | 33299.8 |
| d-alanine--d-alanine ligase | DCX48_09745 | Q6D0I5 | Negative | 2015508 - 2016428 | 33028.4 |
| udp-n-acetylmuramate--l-alanine ligase | DCX48_09750 | Q6D0I4 | Negative | 2016437 - 2017897 | 53034.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DCX48_09755 | Q6D0I3 | Negative | 2017960 - 2019051 | 38629.0 |
| cell division protein ftsw | DCX48_09760 | P0ABG6 | Negative | 2019048 - 2020250 | 44207.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
