Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylating nicotinate-nucleotide diphosphorylase | DCX48_09665 | P30011 | Positive | 1999304 - 2000194 | 32218.5 |
| prepilin peptidase-dependent pilin | DCX48_09670 | P36647 | Positive | 2000520 - 2000966 | 15670.8 |
| integrase | DCX48_09675 | P36645 | Positive | 2000969 - 2002441 | 53785.8 |
| protein transport protein hofc | DCX48_09680 | P36646 | Positive | 2002438 - 2003643 | 45086.8 |
| gmp reductase | DCX48_09685 | A1JJK8 | Negative | 2003728 - 2004768 | 37189.9 |
| dephospho-coa kinase | DCX48_09690 | Q6D0J6 | Positive | 2005062 - 2005688 | 22999.6 |
| cell division protein zapd | DCX48_09695 | Q6D0J5 | Positive | 2005681 - 2006433 | 28950.0 |
| dna gyrase inhibitor yacg | DCX48_09700 | Q6D0J4 | Positive | 2006506 - 2006700 | 7334.56 |
| 8-oxo-dgtp diphosphatase mutt | DCX48_09705 | P08337 | Negative | 2006744 - 2007139 | 14976.7 |
| preprotein translocase subunit seca | DCX48_09710 | Q6D0J2 | Negative | 2007230 - 2009932 | 102387.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
