Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | DCX48_09615 | P0A9P2 | Negative | 1984706 - 1986130 | 50603.3 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | DCX48_09620 | P06959 | Negative | 1986367 - 1988244 | 65544.9 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | DCX48_09625 | P0AFG9 | Negative | 1988259 - 1990922 | 99629.9 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | DCX48_09630 | P0A2S3 | Negative | 1991065 - 1991829 | 29144.9 |
| amino acid permease | DCX48_09635 | P15993 | Positive | 1992501 - 1993859 | 48904.2 |
| mfs transporter | DCX48_09640 | P31435 | Positive | 1994050 - 1995483 | 53415.1 |
| alpha-n-arabinofuranosidase | DCX48_09645 | Q82P90 | Positive | 1995458 - 1996417 | 36857.2 |
| beta-lactamase regulator ampe | DCX48_09650 | P0AE14 | Negative | 1996454 - 1997308 | 31829.2 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | DCX48_09655 | P82973 | Negative | 1997305 - 1997880 | 21480.0 |
| nucleoside-specific channel-forming protein tsx | DCX48_09660 | P0A928 | Positive | 1998299 - 1999159 | 32228.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
