Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-6-phosphate aldolase | DCX48_09565 | P32669 | Positive | 1971972 - 1972637 | 23722.6 |
| upf0231 family protein | DCX48_09570 | Q6D0M1 | Negative | 1972718 - 1973077 | 13829.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | DCX48_09575 | Q8ZRS8 | Negative | 1973248 - 1975845 | 93600.4 |
| duf3060 domain-containing protein | DCX48_09580 | Not Available | Positive | 1976290 - 1976796 | 17635.9 |
| transcriptional regulator | DCX48_09585 | P77295 | Positive | 1976912 - 1977223 | 11581.2 |
| tonb-dependent siderophore receptor | DCX48_09590 | Q05098 | Negative | 1977354 - 1979654 | 83676.2 |
| arac family transcriptional regulator | DCX48_09595 | Q46855 | Positive | 1980081 - 1981064 | 36839.2 |
| immunity protein | DCX48_09600 | P54956 | Positive | 1981173 - 1982501 | 46808.4 |
| alpha/beta fold hydrolase | DCX48_09605 | O34973 | Negative | 1982514 - 1983701 | 43759.0 |
| hypothetical protein | DCX48_09610 | Not Available | Negative | 1983834 - 1984457 | 23253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
