Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DCX48_09465 | P96117 | Positive | 1950806 - 1951516 | 25608.2 |
| metal abc transporter permease | DCX48_09470 | Q9KD29 | Positive | 1951513 - 1952367 | 30367.7 |
| metal abc transporter substrate-binding protein | DCX48_09475 | Q92AG1 | Positive | 1952407 - 1953285 | 31614.3 |
| deor/glpr transcriptional regulator | DCX48_09480 | P44978 | Negative | 1953350 - 1954165 | 29636.6 |
| d-threonate 4-phosphate dehydrogenase | DCX48_09485 | Q6D0N8 | Negative | 1954310 - 1955290 | 34939.7 |
| four-carbon acid sugar kinase family protein | DCX48_09490 | Q6D0N7 | Negative | 1955283 - 1956611 | 46697.6 |
| iron-containing alcohol dehydrogenase | DCX48_09495 | A4IP64 | Positive | 1956847 - 1957983 | 40575.3 |
| dihydrodipicolinate synthase family protein | DCX48_09500 | Q39Z67 | Positive | 1958051 - 1958935 | 31763.9 |
| sodium:solute symporter family protein | DCX48_09505 | Q9GZV3 | Positive | 1958974 - 1960389 | 51092.0 |
| glycosyl hydrolase | DCX48_09510 | Not Available | Positive | 1960393 - 1961580 | 43722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
