Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain-containing protein | DCX48_09365 | Q8ZM86 | Negative | 1925977 - 1926393 | 15234.8 |
| abrb/maze/spovt family dna-binding domain-containing protein | DCX48_09370 | Q05459 | Negative | 1926390 - 1926617 | 8894.57 |
| yjbq family protein | DCX48_09375 | P0AF49 | Negative | 1927574 - 1927993 | 15788.9 |
| excinuclease abc subunit uvra | DCX48_09380 | P0A196 | Negative | 1928011 - 1930845 | 104073.0 |
| single-stranded dna-binding protein | DCX48_09385 | Q8ZJ06 | Positive | 1931091 - 1931654 | 19727.9 |
| amidohydrolase | DCX48_09390 | A0A1I9LN01 | Positive | 1931900 - 1933756 | 66419.9 |
| gnat family n-acetyltransferase | DCX48_09395 | Q06592 | Positive | 1933948 - 1934406 | 18280.6 |
| carboxymuconolactone decarboxylase family protein | DCX48_09400 | P96684 | Negative | 1934658 - 1935089 | 15807.0 |
| gnat family n-acetyltransferase | DCX48_09405 | Q8ZKE6 | Negative | 1935230 - 1935661 | 16127.4 |
| plp-dependent aminotransferase family protein | DCX48_09410 | P49309 | Positive | 1935753 - 1937171 | 52340.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
