Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | DCX48_09265 | Q54SK0 | Negative | 1902020 - 1903408 | 52779.0 |
| quinone oxidoreductase | DCX48_09270 | P40783 | Negative | 1903729 - 1904715 | 34740.4 |
| replicative dna helicase dnab | DCX48_09275 | P0A1Q5 | Positive | 1904896 - 1906302 | 52695.7 |
| alanine racemase | DCX48_09280 | Q3V7N2 | Positive | 1906344 - 1907426 | 39001.7 |
| hypothetical protein | DCX48_09285 | Not Available | Positive | 1907419 - 1908087 | 24595.3 |
| hypothetical protein | DCX48_09290 | Not Available | Positive | 1908251 - 1908580 | 11598.1 |
| lrp/asnc family transcriptional regulator | DCX48_09295 | P45265 | Positive | 1908706 - 1909185 | 17536.3 |
| yitt family protein | DCX48_09300 | P42978 | Positive | 1909440 - 1910054 | 22305.1 |
| aspartate/tyrosine/aromatic aminotransferase | DCX48_09305 | P04693 | Positive | 1910118 - 1911311 | 43872.4 |
| m48 family peptidase | DCX48_09310 | P42597 | Positive | 1911496 - 1911993 | 19332.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
