Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease i | DCX48_01040 | P04995 | Negative | 95174 - 96601 | 54168.5 |
| siderophore abc transporter substrate-binding protein | DCX48_01045 | P94421 | Positive | 96868 - 97833 | 34801.2 |
| abc transporter permease | DCX48_01050 | Q81XB1 | Positive | 97845 - 98807 | 34447.0 |
| enterobactin abc transporter permease | DCX48_01055 | P94419 | Positive | 98794 - 99801 | 36233.3 |
| abc transporter atp-binding protein | DCX48_01060 | P94420 | Positive | 99798 - 100556 | 28013.8 |
| duf496 family protein | DCX48_01065 | Q6D434 | Positive | 100886 - 101203 | 12565.2 |
| comec family protein | DCX48_01070 | P37443 | Positive | 101530 - 103803 | 85638.5 |
| lipid a abc transporter atp-binding protein/permease msba | DCX48_01075 | Q6D437 | Positive | 103841 - 105589 | 64492.9 |
| tetraacyldisaccharide 4'-kinase | DCX48_01080 | Q6D438 | Positive | 105586 - 106587 | 36940.8 |
| hypothetical protein | DCX48_01085 | Q6D439 | Positive | 106699 - 106881 | 6756.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
