Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pard family antitoxin | DCX48_09115 | P58093 | Positive | 1872192 - 1872452 | 10077.9 |
| integrase | DCX48_09120 | Not Available | Positive | 1872403 - 1872585 | 7299.67 |
| lysr family transcriptional regulator | DCX48_09125 | P43011 | Negative | 1872706 - 1873623 | 33873.1 |
| mfs transporter | DCX48_09130 | O34367 | Positive | 1873727 - 1874935 | 43576.0 |
| hypothetical protein | DCX48_09135 | Not Available | Positive | 1875178 - 1875792 | 22371.1 |
| hypothetical protein | DCX48_09140 | Not Available | Negative | 1876232 - 1876618 | 13959.6 |
| entericidin a/b family lipoprotein | DCX48_09145 | P56551 | Positive | 1876993 - 1877121 | 4345.37 |
| gnat family n-acetyltransferase | DCX48_09150 | P0AEH3 | Negative | 1877215 - 1877670 | 16903.2 |
| lysophospholipid transporter lplt | DCX48_09155 | Q6D108 | Negative | 1877683 - 1878906 | 42461.1 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | DCX48_09160 | Q6D107 | Negative | 1878903 - 1881119 | 81636.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
